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C11D2.7 PUA domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177377, updated on 9-Dec-2024

Summary

Official Symbol
C11D2.7
Official Full Name
PUA domain-containing protein
Primary source
WormBase:WBGene00015703
Locus tag
CELE_C11D2.7
See related
AllianceGenome:WB:WBGene00015703
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable RNA binding activity. Predicted to be involved in formation of translation preinitiation complex. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Orthologous to several human genes including MCTS2 (MCTS family member 2). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See C11D2.7 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (6154558..6155396, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene BLOC-1-related complex subunit 5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Queuosine 5'-phosphate N-glycosylase/hydrolase Neighboring gene Ion transport domain-containing protein Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in formation of translation preinitiation complex IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
PUA domain-containing protein
NP_741412.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    6154558..6155396 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_171351.4NP_741412.1  PUA domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741412.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MXH7
    Conserved Domains (2) summary
    cd11609
    Location:481
    MCT1_N; N-terminal domain of multiple copies T cell malignancies 1 and related proteins
    COG2016
    Location:18177
    Tma20; Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domain [Translation, ribosomal structure and biogenesis]