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pqn-22 ZM domain-containing protein;Zasp-like motif domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177369, updated on 28-Oct-2024

Summary

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Official Symbol
pqn-22
Official Full Name
ZM domain-containing protein;Zasp-like motif domain-containing protein
Primary source
WormBase:WBGene00004112
Locus tag
CELE_C46G7.4
See related
AllianceGenome:WB:WBGene00004112
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See pqn-22 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
21
Sequence:
Chromosome: IV; NC_003282.8 (6019672..6033639, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribonuclease kappa Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The TORC1 phosphoproteome in C. elegans reveals roles in transcription and autophagy. Sewell AK, et al. iScience, 2022 May 20. PMID 35479415, Free PMC Article
  2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  3. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  4. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
ZM domain-containing protein;Zasp-like motif domain-containing protein
NP_001293796.1
  • Confirmed by transcript evidence
NP_001293797.1
  • Confirmed by transcript evidence
NP_001293798.1
  • Confirmed by transcript evidence
NP_001293799.1
  • Confirmed by transcript evidence
NP_001293800.1
  • Confirmed by transcript evidence
NP_001293801.1
  • Confirmed by transcript evidence
NP_001293802.1
  • Confirmed by transcript evidence
NP_001293803.1
  • Partially confirmed by transcript evidence
NP_001293804.1
  • Partially confirmed by transcript evidence
NP_001293805.1
  • Partially confirmed by transcript evidence
NP_001293806.1
  • Partially confirmed by transcript evidence
NP_001293807.1
  • Partially confirmed by transcript evidence
NP_001293808.1
  • Partially confirmed by transcript evidence
NP_001293809.1
  • Partially confirmed by transcript evidence
NP_001368418.1
  • Confirmed by transcript evidence
NP_001368419.1
  • Confirmed by transcript evidence
NP_001368420.1
  • Confirmed by transcript evidence
NP_500906.2
  • Confirmed by transcript evidence
NP_500907.2
  • Confirmed by transcript evidence
NP_500908.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    6019672..6033639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001306868.2 → NP_001293797.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293797.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLV0
    Conserved Domains (1) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif

  2. NM_068506.3 → NP_500907.2  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500907.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZA3
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:88 → 146
    DUF4749; Domain of unknown function (DUF4749)

  3. NM_001306869.4 → NP_001293798.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293798.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLU3
    Conserved Domains (2) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif
    pfam15936
    Location:5 → 61
    DUF4749; Domain of unknown function (DUF4749)

  4. NM_001306877.4 → NP_001293806.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293806.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CKJ1
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:90 → 146
    DUF4749; Domain of unknown function (DUF4749)

  5. NM_068505.4 → NP_500906.2  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500906.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZA4
    Conserved Domains (2) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif
    pfam15936
    Location:3 → 61
    DUF4749; Domain of unknown function (DUF4749)

  6. NM_001380256.2 → NP_001368419.1  ZM domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLP8

  7. NM_001306870.4 → NP_001293799.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293799.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLQ4
    Conserved Domains (2) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif
    pfam15936
    Location:5 → 61
    DUF4749; Domain of unknown function (DUF4749)

  8. NM_001306876.3 → NP_001293805.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293805.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CJD2
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:90 → 146
    DUF4749; Domain of unknown function (DUF4749)

  9. NM_001306873.3 → NP_001293802.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293802.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLV6
    Conserved Domains (1) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif

  10. NM_001306871.3 → NP_001293800.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293800.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CJC7
    Conserved Domains (1) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif

  11. NM_001306874.3 → NP_001293803.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293803.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLU8
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:90 → 146
    DUF4749; Domain of unknown function (DUF4749)

  12. NM_001306880.3 → NP_001293809.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293809.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLR2
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:90 → 146
    DUF4749; Domain of unknown function (DUF4749)

  13. NM_001306879.3 → NP_001293808.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293808.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLV2
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:90 → 146
    DUF4749; Domain of unknown function (DUF4749)

  14. NM_001306878.3 → NP_001293807.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293807.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLW0
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:90 → 146
    DUF4749; Domain of unknown function (DUF4749)

  15. NM_001306875.3 → NP_001293804.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293804.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLQ8
    Conserved Domains (2) summary
    smart00735
    Location:88 → 113
    ZM; ZASP-like motif
    pfam15936
    Location:90 → 146
    DUF4749; Domain of unknown function (DUF4749)

  16. NM_001306872.3 → NP_001293801.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293801.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CKI4
    Conserved Domains (1) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif

  17. NM_001306867.3 → NP_001293796.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293796.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CKH6
    Conserved Domains (2) summary
    smart00735
    Location:3 → 28
    ZM; ZASP-like motif
    pfam15936
    Location:5 → 61
    DUF4749; Domain of unknown function (DUF4749)

  18. NM_001380255.1 → NP_001368420.1  ZM domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CJC4

  19. NM_001380257.1 → NP_001368418.1  ZM domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLT8

  20. NM_068507.6 → NP_500908.2  ZM domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500908.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TY23
Nucleotide Protein
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