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F41H10.3 PHD-type domain-containing protein;RNA-directed RNA polymerase [ Caenorhabditis elegans ]

Gene ID: 177319, updated on 4-Jan-2025

Summary

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Official Symbol
F41H10.3
Official Full Name
PHD-type domain-containing protein;RNA-directed RNA polymerase
Primary source
WormBase:WBGene00018316
Locus tag
CELE_F41H10.3
See related
AllianceGenome:WB:WBGene00018316
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable RNA-dependent RNA polymerase activity. Predicted to be involved in RNA-templated transcription. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F41H10.3 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
12
Sequence:
Chromosome: IV; NC_003282.8 (5369801..5374777)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene GRIP domain-containing protein Neighboring gene Vacuolar fusion protein MON1 homolog Neighboring gene Long chain fatty acid elongase 5 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asymmetric Arginine Dimethylation Modulates Mitochondrial Energy Metabolism and Homeostasis in Caenorhabditis elegans. Sha L, et al. Mol Cell Biol, 2017 Mar 15. PMID 27994012, Free PMC Article
  2. ITSN-1 controls vesicle recycling at the neuromuscular junction and functions in parallel with DAB-1. Wang W, et al. Traffic, 2008 May. PMID 18298590, Free PMC Article
  3. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  4. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
  5. SIN-3 acts in distinct complexes to regulate the germline transcriptional program in Caenorhabditis elegans. Robert VJ, et al. Development, 2023 Nov 1. PMID 37818613, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables RNA-dependent RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in RNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
PHD-type domain-containing protein;RNA-directed RNA polymerase
NP_001293756.1
  • Confirmed by transcript evidence
NP_001360037.1
  • Partially confirmed by transcript evidence
NP_001368391.1
  • Confirmed by transcript evidence
NP_001368392.1
  • Confirmed by transcript evidence
NP_741398.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    5369801..5374777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_171339.8 → NP_741398.1  RNA-directed RNA polymerase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741398.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L025

  2. NM_001306827.3 → NP_001293756.1  RNA-directed RNA polymerase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293756.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLL5

  3. NM_001372817.2 → NP_001360037.1  RNA-directed RNA polymerase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MQ54

  4. NM_001380225.2 → NP_001368391.1  PHD-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CK94

  5. NM_001380226.1 → NP_001368392.1  PHD-type domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    V6CLM1
Nucleotide Protein
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