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arrd-17 Arrestin domain-containing protein 17 [ Caenorhabditis elegans ]

Gene ID: 176799, updated on 2-Nov-2024

Summary

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Official Symbol
arrd-17
Official Full Name
Arrestin domain-containing protein 17
Primary source
WormBase:WBGene00011732
Locus tag
CELE_T12D8.4
See related
AllianceGenome:WB:WBGene00011732
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables protein phosphatase 2B binding activity. Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Is expressed in nervous system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See arrd-17 in Genome Data Viewer
Location:
chromosome: III
Exon count:
9
Sequence:
Chromosome: III; NC_003281.10 (13627056..13630808, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Myosin-2 essential light chain Neighboring gene Transcription initiation factor TFIID subunit 9 Neighboring gene Secreted protein Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CNP-1 (ARRD-17), a novel substrate of calcineurin, is critical for modulation of egg-laying and locomotion in response to food and lysine sensation in Caenorhabditis elegans. Jee C, et al. J Mol Biol, 2012 Mar 30. PMID 22300764
  2. Caenorhabditis elegans in the study of SMN-interacting proteins: a role for SMI-1, an orthologue of human Gemin2 and the identification of novel components of the SMN complex. Burt EC, et al. Invert Neurosci, 2006 Dec. PMID 16964508
  3. Transcriptomics of ivermectin response in Caenorhabditis elegans: Integrating abamectin quantitative trait loci and comparison to the Ivermectin-exposed DA1316 strain. Dube F, et al. PLoS One, 2023. PMID 37141255, Free PMC Article
  4. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
  5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein phosphatase 2B binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in behavior IEA
Inferred from Electronic Annotation
more info
  
involved_in protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Arrestin domain-containing protein 17
NP_499816.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    13627056..13630808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067415.6 → NP_499816.2  Arrestin domain-containing protein 17 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499816.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O45782
    Conserved Domains (2) summary
    pfam00339
    Location:7 → 155
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    pfam02752
    Location:181 → 304
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O45782.2

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