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hrpc-1 Zinc finger transcription factor family protein 1 [ Caenorhabditis elegans ]

Gene ID: 176236, updated on 4-Jan-2025

Summary

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Official Symbol
hrpc-1
Official Full Name
Zinc finger transcription factor family protein 1
Primary source
WormBase:WBGene00018833
Locus tag
CELE_F54F2.5
See related
AllianceGenome:WB:WBGene00018833
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in head; intestine; and pharyngeal neurons. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See hrpc-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
14
Sequence:
Chromosome: III; NC_003281.10 (8787092..8792351, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Soluble NSF attachment protein 29 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Zinc finger protein zfp-1 Neighboring gene ncRNA Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Caenorhabditis elegans algn-2 Is Critical for Longevity Conferred by Enhanced Nonsense-Mediated mRNA Decay. Kim EJE, et al. iScience, 2020 Nov 20. PMID 33225240, Free PMC Article
  2. A genomewide screen for suppressors of par-2 uncovers potential regulators of PAR protein-dependent cell polarity in Caenorhabditis elegans. Labbé JC, et al. Genetics, 2006 Sep. PMID 16816419, Free PMC Article
  3. KIN-4/MAST kinase promotes PTEN-mediated longevity of Caenorhabditis elegans via binding through a PDZ domain. An SWA, et al. Aging Cell, 2019 Jun. PMID 30773781, Free PMC Article
  4. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  5. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Zinc finger transcription factor family protein 1
NP_498942.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    8787092..8792351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066541.5 → NP_498942.1  Zinc finger transcription factor family protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498942.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34450, Q8IG18
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P34450.2

Gene LinkOut

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