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C18F10.7 ANK_REP_REGION domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175889, updated on 4-Jan-2025

Summary

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Official Symbol
C18F10.7
Official Full Name
ANK_REP_REGION domain-containing protein
Primary source
WormBase:WBGene00015978
Locus tag
CELE_C18F10.7
See related
AllianceGenome:WB:WBGene00015978
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in late endosome and plasma membrane. Predicted to be active in cytoplasm. Is expressed in several structures, including anal depressor muscle; head mesodermal cell; nervous system; rectal gland cell; and reproductive system. Orthologous to several human genes including ANKRD13B (ankyrin repeat domain 13B). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C18F10.7 in Genome Data Viewer
Location:
chromosome: III
Exon count:
8
Sequence:
Chromosome: III; NC_003281.10 (6276048..6278351, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene WSN domain-containing protein Neighboring gene High mobility group protein 1.2 Neighboring gene Gastrulation-defective protein 3 Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in late endosome IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ANK_REP_REGION domain-containing protein
NP_498374.1
  • Confirmed by transcript evidence
NP_741185.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6276048..6278351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065973.6 → NP_498374.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498374.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18099
    Conserved Domains (3) summary
    sd00045
    Location:12 → 41
    ANK; ANK repeat [structural motif]
    pfam11904
    Location:159 → 458
    GPCR_chapero_1; GPCR-chaperone
    pfam12796
    Location:12 → 74
    Ank_2; Ankyrin repeats (3 copies)

  2. NM_171160.5 → NP_741185.1  ANK_REP_REGION domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741185.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MNV2
    Conserved Domains (2) summary
    sd00045
    Location:12 → 41
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:12 → 74
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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