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C23G10.1 Serine/threonine-protein phosphatase C23G10.1 [ Caenorhabditis elegans ]

Gene ID: 175880, updated on 4-Jan-2025

Summary

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Official Symbol
C23G10.1
Official Full Name
Serine/threonine-protein phosphatase C23G10.1
Primary source
WormBase:WBGene00016010
Locus tag
CELE_C23G10.1
See related
AllianceGenome:WB:WBGene00016010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein serine/threonine phosphatase activity. Involved in defense response to Gram-negative bacterium. Predicted to be active in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C23G10.1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
9
Sequence:
Chromosome: III; NC_003281.10 (6209284..6212904)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Small ribosomal subunit protein uS3 Neighboring gene RutC family protein C23G10.2 Neighboring gene Uncharacterized protein Neighboring gene Neuropeptide-Like Protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of immune response against Vibrio cholerae hemolysin in Caenorhabditis elegans. Sahu SN, et al. PLoS One, 2012. PMID 22675448, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables myosin phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphoprotein phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in defense response to Gram-negative bacterium IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Serine/threonine-protein phosphatase C23G10.1
NP_001367543.1
  • Confirmed by transcript evidence
NP_001367544.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6209284..6212904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001379749.1 → NP_001367544.1  Serine/threonine-protein phosphatase C23G10.1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G8JY37, P48459
    Conserved Domains (1) summary
    smart00156
    Location:162 → 432
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain

  2. NM_001379750.1 → NP_001367543.1  Serine/threonine-protein phosphatase C23G10.1 [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    smart00156
    Location:60 → 330
    PP2Ac; Protein phosphatase 2A homologues, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P48459.3

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