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attf-4 AT hook-containing protein attf-4 [ Caenorhabditis elegans ]

Gene ID: 175858, updated on 4-Jan-2025

Summary

Official Symbol
attf-4
Official Full Name
AT hook-containing protein attf-4
Primary source
WormBase:WBGene00015477
Locus tag
CELE_C05D10.1
See related
AllianceGenome:WB:WBGene00015477
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable DNA binding activity. Is expressed in several structures, including head; intestine; pharyngeal-intestinal valve; tail neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See attf-4 in Genome Data Viewer
Location:
chromosome: III
Exon count:
6
Sequence:
Chromosome: III; NC_003281.10 (6080563..6084748)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Mitogen-activated protein kinase 15 Neighboring gene ABC transporter ATP-binding protein/permease wht-1 Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
AT hook-containing protein attf-4
NP_001367434.1
  • Confirmed by transcript evidence
NP_001367435.1
  • Confirmed by transcript evidence
NP_741168.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6080563..6084748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_171147.7NP_741168.1  AT hook-containing protein attf-4 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_741168.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    H2KYG7, Q11178, Q5TYM0
  2. NM_001379741.2NP_001367434.1  AT hook-containing protein attf-4 [Caenorhabditis elegans]

    Status: REVIEWED

  3. NM_001379742.1NP_001367435.1  AT hook-containing protein attf-4 [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    PHA03247
    Location:105217
    PHA03247; large tegument protein UL36; Provisional