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F01F1.2 COX assembly mitochondrial protein [ Caenorhabditis elegans ]

Gene ID: 175828, updated on 2-Nov-2024

Summary

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Official Symbol
F01F1.2
Official Full Name
COX assembly mitochondrial protein
Primary source
WormBase:WBGene00017159
Locus tag
CELE_F01F1.2
See related
AllianceGenome:WB:WBGene00017159
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in mitochondrion. Is expressed in body wall musculature; intestine; and pharyngeal muscle cell. Orthologous to human CMC1 (C-X9-C motif containing 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F01F1.2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003281.10 (5878554..5879415)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene MIF4G domain-containing protein Neighboring gene Fructose-bisphosphate aldolase 2 Neighboring gene Abnormal cell migration protein 21 Neighboring gene ncRNA Neighboring gene SAC3/GANP/THP3 conserved domain-containing protein;SAC3_GANP domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ShKT domain-containing protein Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
COX assembly mitochondrial protein
NP_498273.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    5878554..5879415
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065872.7 → NP_498273.1  COX assembly mitochondrial protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_498273.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19093
    Conserved Domains (1) summary
    pfam08583
    Location:65 → 135
    Cmc1; Cytochrome c oxidase biogenesis protein Cmc1 like
Nucleotide Protein
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