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glb-11 GLoBin related [ Caenorhabditis elegans ]

Gene ID: 175516, updated on 2-Nov-2024

Summary

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Official Symbol
glb-11
Official Full Name
GLoBin related
Primary source
WormBase:WBGene00007981
Locus tag
CELE_C36E8.2
See related
AllianceGenome:WB:WBGene00007981
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable heme binding activity and oxygen binding activity. Is expressed in neurons; pharynx; and somatic nervous system. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See glb-11 in Genome Data Viewer
Location:
chromosome: III
Exon count:
5
Sequence:
Chromosome: III; NC_003281.10 (3989298..3992189, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene LIM zinc-binding domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene transcription initiation factor IA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Caenorhabditis globin gene family reveals extensive nematode-specific radiation and diversification. Hoogewijs D, et al. BMC Evol Biol, 2008 Oct 9. PMID 18844991, Free PMC Article
  2. Wide diversity in structure and expression profiles among members of the Caenorhabditis elegans globin protein family. Hoogewijs D, et al. BMC Genomics, 2007 Oct 4. PMID 17916248, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables oxygen binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
GLoBin related
NP_497802.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    3989298..3992189 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065401.5 → NP_497802.2  GLoBin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497802.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O62089
    Conserved Domains (1) summary
    cd01040
    Location:57 → 176
    Mb_like; myoglobin_like; M family globin domain
Nucleotide Protein
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