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gldi-9 Actin interacting protein 3-like C-terminal domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 175391, updated on 9-Dec-2024

Summary

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Official Symbol
gldi-9
Official Full Name
Actin interacting protein 3-like C-terminal domain-containing protein
Primary source
WormBase:WBGene00022180
Locus tag
CELE_Y71H2AM.15
See related
AllianceGenome:WB:WBGene00022180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in cell junction and striated muscle dense body. Orthologous to human KIAA1217 (KIAA1217) and SRCIN1 (SRC kinase signaling inhibitor 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See gldi-9 in Genome Data Viewer
Location:
chromosome: III
Exon count:
13
Sequence:
Chromosome: III; NC_003281.10 (2747120..2756360, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Ras-related protein Rab-18 Neighboring gene Carboxylesterase type B domain-containing protein Neighboring gene L-Fucosyltransferase Neighboring gene ncRNA Neighboring gene intestinal acid PHOsphatase Neighboring gene ncRNA Neighboring gene HMG box domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. UNC-83 coordinates kinesin-1 and dynein activities at the nuclear envelope during nuclear migration. Fridolfsson HN, et al. Dev Biol, 2010 Feb 15. PMID 20005871, Free PMC Article
  2. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
  3. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
  4. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  5. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cell junction HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in striated muscle dense body HDA PubMed 

General protein information

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Preferred Names
Actin interacting protein 3-like C-terminal domain-containing protein
NP_001033381.2
  • Confirmed by transcript evidence
NP_001033382.1
  • Confirmed by transcript evidence
NP_001408280.1
  • Confirmed by transcript evidence
NP_001408281.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    2747120..2756360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001038292.5 → NP_001033381.2  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001033381.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L0S5
    Conserved Domains (1) summary
    pfam03915
    Location:210 → 284
    AIP3; Actin interacting protein 3

  2. NM_001038293.5 → NP_001033382.1  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001033382.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q3V5J3
    Conserved Domains (1) summary
    pfam03915
    Location:206 → 280
    AIP3; Actin interacting protein 3

  3. NM_001421354.1 → NP_001408280.1  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

  4. NM_001421353.1 → NP_001408281.1  Actin interacting protein 3-like C-terminal domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

Nucleotide Protein
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