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pqn-41 Polyglutamine-repeat protein pqn-41 [ Caenorhabditis elegans ]

Gene ID: 175335, updated on 4-Jan-2025

Summary

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Official Symbol
pqn-41
Official Full Name
Polyglutamine-repeat protein pqn-41
Primary source
WormBase:WBGene00004128
Locus tag
CELE_F53A3.4
See related
AllianceGenome:WB:WBGene00004128
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in cytoplasm. Is expressed widely. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See pqn-41 in Genome Data Viewer
Location:
chromosome: III
Exon count:
24
Sequence:
Chromosome: III; NC_003281.10 (1905958..1939569)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene PNPLA domain-containing protein Neighboring gene HMG box domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene MARVEL domain-containing protein Neighboring gene DNA polymerase eta Neighboring gene Ribosomal Protein, Small subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003281.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PolyQ disease: misfiring of a developmental cell death program? Blum ES, et al. Trends Cell Biol, 2013 Apr. PMID 23228508, Free PMC Article
  2. Development. Cell death by glutamine repeats? Link CD, et al. Science, 2012 Feb 24. PMID 22362996
  3. TDP-1 and FUST-1 co-inhibit exon inclusion and control fertility together with transcriptional regulation. Taylor M, et al. Nucleic Acids Res, 2023 Oct 13. PMID 37587694, Free PMC Article
  4. Microtubule depolymerization in Caenorhabditis elegans touch receptor neurons reduces gene expression through a p38 MAPK pathway. Bounoutas A, et al. Proc Natl Acad Sci U S A, 2011 Mar 8. PMID 21368137, Free PMC Article
  5. Control of nonapoptotic developmental cell death in Caenorhabditis elegans by a polyglutamine-repeat protein. Blum ES, et al. Science, 2012 Feb 24. PMID 22363008, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Polyglutamine-repeat protein pqn-41
NP_001122699.2
  • Confirmed by transcript evidence
NP_001254849.1
  • Partially confirmed by transcript evidence
NP_001360184.1
  • Confirmed by transcript evidence
NP_497478.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    1905958..1939569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065077.6 → NP_497478.2  Polyglutamine-repeat protein pqn-41 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497478.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C7IVR4

  2. NM_001129227.4 → NP_001122699.2  Polyglutamine-repeat protein pqn-41 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122699.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C7IVR4, C7IVR5, C7IVR6, G4RT56, G4RT57, G4RT58, S6FMX9

  3. NM_001267920.3 → NP_001254849.1  Polyglutamine-repeat protein pqn-41 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254849.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    C7IVR4

  4. NM_001373851.2 → NP_001360184.1  Polyglutamine-repeat protein pqn-41 [Caenorhabditis elegans]

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
C7IVR4.2

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