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F54F11.1 SGNH_hydro domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174995, updated on 4-Jan-2025

Summary

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Official Symbol
F54F11.1
Official Full Name
SGNH_hydro domain-containing protein
Primary source
WormBase:WBGene00010069
Locus tag
CELE_F54F11.1
See related
AllianceGenome:WB:WBGene00010069
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable hydrolase activity, acting on ester bonds. Is expressed in pharyngeal gland cell. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F54F11.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (13503953..13506908)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene MARVEL domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Peptidase_M13_N domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Serpentine receptor class epsilon-45 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
SGNH_hydro domain-containing protein
NP_496841.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    13503953..13506908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064440.3 → NP_496841.1  SGNH_hydro domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496841.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O45568
    Conserved Domains (1) summary
    cd01846
    Location:32 → 276
    fatty_acyltransferase_like; Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
Nucleotide Protein
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