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pes-10 Patterned expression site protein 10 [ Caenorhabditis elegans ]

Gene ID: 174920, updated on 2-Nov-2024

Summary

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Official Symbol
pes-10
Official Full Name
Patterned expression site protein 10
Primary source
WormBase:WBGene00003983
Locus tag
CELE_Y46G5A.27
See related
AllianceGenome:WB:WBGene00003983
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Located in cytoplasm and nucleus. Is expressed in ABa; ABp; and EMS. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pes-10 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (12846191..12847836, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Gamma-aminobutyric acid receptor subunit beta Neighboring gene MI domain-containing protein Neighboring gene ncRNA Neighboring gene Uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. cdk-7 Is required for mRNA transcription and cell cycle progression in Caenorhabditis elegans embryos. Wallenfang MR, et al. Proc Natl Acad Sci U S A, 2002 Apr 16. PMID 11960010, Free PMC Article
  2. cis-Regulatory control of three cell fate-specific genes in vulval organogenesis of Caenorhabditis elegans and C. briggsae. Kirouac M, et al. Dev Biol, 2003 May 1. PMID 12710959
  3. An early pharyngeal muscle enhancer from the Caenorhabditis elegans ceh-22 gene is targeted by the Forkhead factor PHA-4. Vilimas T, et al. Dev Biol, 2004 Feb 15. PMID 14738885
  4. The C. elegans MEX-1 protein is present in germline blastomeres and is a P granule component. Guedes S, et al. Development, 1997 Feb. PMID 9043088
  5. Muscle and nerve-specific regulation of a novel NK-2 class homeodomain factor in Caenorhabditis elegans. Harfe BD, et al. Development, 1998 Feb. PMID 9425137

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Patterned expression site protein 10
NP_496732.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    12846191..12847836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064331.7 → NP_496732.1  Patterned expression site protein 10 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496732.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P41991
    Conserved Domains (1) summary
    pfam07149
    Location:1 → 400
    Pes-10; Pes-10
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P41991.1

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