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ebp-2 Calponin homology domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174744, updated on 4-Jan-2025

Summary

Official Symbol
ebp-2
Official Full Name
Calponin homology domain-containing protein
Primary source
WormBase:WBGene00012156
Locus tag
CELE_VW02B12L.3
See related
AllianceGenome:WB:WBGene00012156
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable microtubule plus-end binding activity. Predicted to be involved in protein localization to microtubule; regulation of microtubule polymerization or depolymerization; and spindle assembly. Located in several cellular components, including kinetochore; microtubule cytoskeleton; and non-motile cilium. Is expressed in several structures, including hypodermis; intestine; and nervous system. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See ebp-2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (11442725..11444003)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene tRNA Neighboring gene Adr-2-binding protein 1 Neighboring gene Secreted protein Neighboring gene ncRNA Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 
enables microtubule plus-end binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in cell cycle IEA
Inferred from Electronic Annotation
more info
 
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in protein localization to microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of microtubule polymerization or depolymerization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in spindle assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cell cortex IDA
Inferred from Direct Assay
more info
PubMed 
located_in centrosome IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytoplasmic microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in kinetochore IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule IDA
Inferred from Direct Assay
more info
PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
is_active_in microtubule organizing center IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in microtubule plus-end IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in microtubule plus-end IDA
Inferred from Direct Assay
more info
PubMed 
located_in non-motile cilium IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in spindle midzone IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
Calponin homology domain-containing protein
NP_496438.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    11442725..11444003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064037.7NP_496438.1  Calponin homology domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496438.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XXA2
    Conserved Domains (2) summary
    pfam00307
    Location:16113
    CH; Calponin homology (CH) domain
    pfam03271
    Location:230269
    EB1; EB1-like C-terminal motif