ZK1307.9 Coiled-coil domain-containing protein 130 homolog [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: ZK1307.9
Official Full Name: Coiled-coil domain-containing protein 130 homolog
Primary source: WormBase:WBGene00014250
Locus tag: CELE_ZK1307.9
See related: AllianceGenome:WB:WBGene00014250
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to be involved in RNA splicing. Predicted to be part of U2-type spliceosomal complex and post-mRNA release spliceosomal complex. Orthologous to human YJU2B (YJU2 splicing factor homolog B). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See ZK1307.9 in Genome Data Viewer

Location:: chromosome: II

Exon count:: 4

Sequence:: Chromosome: II; NC_003280.10 (9649491..9650962)

Chromosome II - NC_003280.10 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003280.10

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Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

ZK1307.5 (e-PCR)
- UniSTS:310439

ZK1307.9 (e-PCR)
- UniSTS:310441

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in RNA splicing	IBA Inferred from Biological aspect of Ancestor more info
involved_in mRNA splicing, via spliceosome	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of U2-type spliceosomal complex	IBA Inferred from Biological aspect of Ancestor more info
part_of post-mRNA release spliceosomal complex	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: Coiled-coil domain-containing protein 130 homolog

NP_496077.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

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Reference assembly

Genomic

NC_003280.10 Reference assembly

Range

9649491..9650962

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_063676.7 → NP_496077.1 Coiled-coil domain-containing protein 130 homolog [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q09651

Conserved Domains (2) summary

COG5134
Location:8 → 210

COG5134; Uncharacterized conserved protein [Function unknown]

pfam04502
Location:8 → 227

DUF572; Family of unknown function (DUF572)