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T01H3.2 Peroxin/Ferlin domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174271, updated on 4-Jan-2025

Summary

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Official Symbol
T01H3.2
Official Full Name
Peroxin/Ferlin domain-containing protein
Primary source
WormBase:WBGene00011348
Locus tag
CELE_T01H3.2
See related
AllianceGenome:WB:WBGene00011348
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Orthologous to human TECPR1 (tectonin beta-propeller repeat containing 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See T01H3.2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
16
Sequence:
Chromosome: II; NC_003280.10 (7874238..7877994, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Zinc finger transcription factor family protein 17 Neighboring gene MFS domain-containing protein Neighboring gene ncRNA Neighboring gene V-type proton ATPase 21 kDa proteolipid subunit c'' Neighboring gene XH domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
  2. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Peroxin/Ferlin domain-containing protein
NP_495658.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7874238..7877994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063257.8 → NP_495658.1  Peroxin/Ferlin domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495658.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22088
    Conserved Domains (4) summary
    smart00694
    Location:726 → 759
    DysFC; Dysferlin domain, C-terminal region
    smart00693
    Location:72 → 129
    DysFN; Dysferlin domain, N-terminal region
    PHA00003
    Location:331 → 440
    B; internal scaffolding protein
    pfam06462
    Location:207 → 235
    Hyd_WA; Propeller
Nucleotide Protein
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