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Mns1 meiosis-specific nuclear structural protein 1 [ Mus musculus (house mouse) ]

Gene ID: 17427, updated on 27-Nov-2024

Summary

Official Symbol
Mns1provided by MGI
Official Full Name
meiosis-specific nuclear structural protein 1provided by MGI
Primary source
MGI:MGI:107933
See related
Ensembl:ENSMUSG00000032221 AllianceGenome:MGI:107933
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable identical protein binding activity. Involved in positive regulation of cilium assembly and sperm axoneme assembly. Acts upstream of or within cilium organization and left/right axis specification. Located in axoneme; intermediate filament; and nuclear envelope. Is active in axonemal A tubule inner sheath and sperm flagellum. Is expressed in several structures, including brain; genitourinary system; gut; hemolymphoid system gland; and liver and biliary system. Human ortholog(s) of this gene implicated in visceral heterotaxy. Orthologous to human MNS1 (meiosis specific nuclear structural 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in liver E14 (RPKM 19.9), liver E14.5 (RPKM 12.9) and 7 other tissues See more
Orthologs
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Genomic context

See Mns1 in Genome Data Viewer
Location:
9 D; 9 40.08 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (72345276..72366036)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (72437821..72458581)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 280D Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-seq mESC enhancer starr_24594 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:72238180-72238457 Neighboring gene predicted gene 27230 Neighboring gene cDNA sequence BC065403 Neighboring gene STARR-positive B cell enhancer mm9_chr9:72286185-72286486 Neighboring gene CapStarr-seq enhancer MGSCv37_chr9:72297295-72297404 Neighboring gene STARR-positive B cell enhancer ABC_E5084 Neighboring gene testis expressed gene 9 Neighboring gene predicted gene, 33004 Neighboring gene RIKEN cDNA 4930509E16 gene Neighboring gene STARR-positive B cell enhancer ABC_E8299 Neighboring gene STARR-positive B cell enhancer ABC_E5085 Neighboring gene regulatory factor X, 7 Neighboring gene 60S ribosomal protein L38 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (1)  1 citation

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium organization IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cilium organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in flagellated sperm motility IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within left/right axis specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cilium assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in sperm axoneme assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in axonemal A tubule inner sheath IDA
Inferred from Direct Assay
more info
PubMed 
located_in axonemal microtubule ISO
Inferred from Sequence Orthology
more info
 
located_in axonemal microtubule ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in axoneme IDA
Inferred from Direct Assay
more info
PubMed 
located_in axoneme ISO
Inferred from Sequence Orthology
more info
 
located_in axoneme ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in intermediate filament IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in motile cilium IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nuclear envelope IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in sperm flagellum IDA
Inferred from Direct Assay
more info
PubMed 
located_in sperm flagellum IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
meiosis-specific nuclear structural protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001410429.1NP_001397358.1  meiosis-specific nuclear structural protein 1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC111135, CT954326
  2. NM_001410430.1NP_001397359.1  meiosis-specific nuclear structural protein 1 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC111135
  3. NM_008613.4NP_032639.1  meiosis-specific nuclear structural protein 1 isoform 1

    See identical proteins and their annotated locations for NP_032639.1

    Status: VALIDATED

    Source sequence(s)
    AC111135, CT954326
    Consensus CDS
    CCDS40684.1
    UniProtKB/Swiss-Prot
    Q61884
    Related
    ENSMUSP00000034746.8, ENSMUST00000034746.10
    Conserved Domains (1) summary
    pfam13868
    Location:117462
    TPH; Trichohyalin-plectin-homology domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    72345276..72366036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036154641.1XP_036010534.1  meiosis-specific nuclear structural protein 1 isoform X1

    Conserved Domains (1) summary
    pfam13868
    Location:173524
    TPH; Trichohyalin-plectin-homology domain