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ZK1127.4 Protein BCCIP homolog [ Caenorhabditis elegans ]

Gene ID: 174153, updated on 9-Dec-2024

Summary

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Official Symbol
ZK1127.4
Official Full Name
Protein BCCIP homolog
Primary source
WormBase:WBGene00022851
Locus tag
CELE_ZK1127.4
See related
AllianceGenome:WB:WBGene00022851
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in nucleus. Orthologous to human BCCIP (BRCA2 and CDKN1A interacting protein). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See ZK1127.4 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (7053949..7055186)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene TIGR04255 family protein Neighboring gene Phage tail protein Neighboring gene Uncharacterized protein Neighboring gene Putative cystathionine gamma-lyase 2 Neighboring gene fatty Acid CoA Synthetase family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. FACT Sets a Barrier for Cell Fate Reprogramming in Caenorhabditis elegans and Human Cells. Kolundzic E, et al. Dev Cell, 2018 Sep 10. PMID 30078731, Free PMC Article
  2. Protein interaction mapping in C. elegans using proteins involved in vulval development. Walhout AJ, et al. Science, 2000 Jan 7. PMID 10615043
  3. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  4. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
  5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Protein BCCIP homolog
NP_495447.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7053949..7055186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063046.7 → NP_495447.1  Protein BCCIP homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495447.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q23402
    Conserved Domains (1) summary
    pfam13862
    Location:67 → 287
    BCIP; p21-C-terminal region-binding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q23402.1

Gene LinkOut

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