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lido-15 MADF domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173726, updated on 4-Jan-2025

Summary

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Official Symbol
lido-15
Official Full Name
MADF domain-containing protein
Primary source
WormBase:WBGene00018804
Locus tag
CELE_F54D10.3
See related
AllianceGenome:WB:WBGene00018804
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See lido-15 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (3812282..3813428)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene pseudo Neighboring gene DUF38 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
MADF domain-containing protein
NP_494658.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    3812282..3813428
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062257.2 → NP_494658.1  MADF domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494658.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TZ87
    Conserved Domains (1) summary
    pfam03353
    Location:1 → 302
    Lin-8; Ras-mediated vulval-induction antagonizt
Nucleotide Protein
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