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CHLNCDRAFT_133304 hypothetical protein [ Chlorella variabilis ]

Gene ID: 17359613, updated on 28-Dec-2023

Summary

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Gene symbol
CHLNCDRAFT_133304
Gene description
hypothetical protein
Locus tag
CHLNCDRAFT_133304
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chlorella variabilis (strain: NC64A)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
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Genomic context

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See CHLNCDRAFT_133304 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
16

NW_005435087.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005435087.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Blanc G, et al. Plant Cell, 2010 Sep. PMID 20852019, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_005851827.1
  • similar to flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005435087.1 Reference assembly

    Range
    1573456..1579039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005851765.1 → XP_005851827.1  hypothetical protein CHLNCDRAFT_133304 [Chlorella variabilis]

    See identical proteins and their annotated locations for XP_005851827.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E1Z2U2
    Conserved Domains (2) summary
    COG0515
    Location:395 → 451
    SPS1; Serine/threonine protein kinase [Signal transduction mechanisms]
    cl21453
    Location:597 → 837
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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