U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHLNCDRAFT_15257 hypothetical protein [ Chlorella variabilis ]

Gene ID: 17359608, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
CHLNCDRAFT_15257
Gene description
hypothetical protein
Locus tag
CHLNCDRAFT_15257
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chlorella variabilis (strain: NC64A)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHLNCDRAFT_15257 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_005435087.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene expressed protein Neighboring gene expressed protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005435087.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Blanc G, et al. Plant Cell, 2010 Sep. PMID 20852019, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
hypothetical protein
XP_005852152.1
  • similar to caseinolytic protease X (E.coli) (predicted)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005435087.1 Reference assembly

    Range
    1505150..1505371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005852090.1 → XP_005852152.1  hypothetical protein CHLNCDRAFT_15257, partial [Chlorella variabilis]

    See identical proteins and their annotated locations for XP_005852152.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E1Z2T0
    Conserved Domains (1) summary
    smart01086
    Location:4 → 72
    ClpB_D2-small; C-terminal, D2-small domain, of ClpB protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases