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F44F1.4 SKICH domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173190, updated on 4-Jan-2025

Summary

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Official Symbol
F44F1.4
Official Full Name
SKICH domain-containing protein
Primary source
WormBase:WBGene00009696
Locus tag
CELE_F44F1.4
See related
AllianceGenome:WB:WBGene00009696
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in autophagy. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F44F1.4 in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (13263803..13265570, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Ig-like domain-containing protein;PH_RBD domain-containing protein Neighboring gene Very Early Transcript Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
SKICH domain-containing protein
NP_493331.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    13263803..13265570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060930.2 → NP_493331.2  SKICH domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493331.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O02263
    Conserved Domains (1) summary
    pfam13476
    Location:335 → 487
    AAA_23; AAA domain
Nucleotide Protein
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