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C47B2.9 RNA-binding S4 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 173173, updated on 4-Jan-2025

Summary

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Official Symbol
C47B2.9
Official Full Name
RNA-binding S4 domain-containing protein
Primary source
WormBase:WBGene00008134
Locus tag
CELE_C47B2.9
See related
AllianceGenome:WB:WBGene00008134
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable RNA binding activity. Predicted to be involved in regulation of mitochondrial transcription. Predicted to be active in mitochondrion. Orthologous to human MTRES1 (mitochondrial transcription rescue factor 1). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C47B2.9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (12983004..12983974)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene UDP-glucose 4-epimerase Neighboring gene Peroxisomal biogenesis factor 11 Neighboring gene Tr-type G domain-containing protein Neighboring gene Neuropeptide-Like Protein Neighboring gene Smu-1 suppressor of mec-8 and unc-52 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of mitochondrial transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
RNA-binding S4 domain-containing protein
NP_493277.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    12983004..12983974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060876.6 → NP_493277.2  RNA-binding S4 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_493277.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U3L4
    Conserved Domains (1) summary
    pfam01479
    Location:56 → 102
    S4; S4 domain
Nucleotide Protein
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