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F55D12.6 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 172559, updated on 4-Jan-2025

Summary

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Official Symbol
F55D12.6
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00010114
Locus tag
CELE_F55D12.6
See related
AllianceGenome:WB:WBGene00010114
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See F55D12.6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (7901932..7903243)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene CRAL-TRIO domain-containing protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Nuclear hormone receptor unc-55 Neighboring gene Activin_recp domain-containing protein;Serine/threonine-protein kinase kinx Neighboring gene Non-specific serine/threonine protein kinase Neighboring gene Neuroblastoma-amplified sequence

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Uncharacterized protein
NP_492182.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    7901932..7903243
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059781.7 → NP_492182.1  Uncharacterized protein CELE_F55D12.6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492182.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O62264
    Conserved Domains (1) summary
    cl19857
    Location:120 → 165
    DUF2126; Putative amidoligase enzyme (DUF2126)
Nucleotide Protein
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