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T28F4.4 Inverted formin-2;PUM-HD domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 172502, updated on 4-Jan-2025

Summary

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Official Symbol
T28F4.4
Official Full Name
Inverted formin-2;PUM-HD domain-containing protein
Primary source
WormBase:WBGene00012139
Locus tag
CELE_T28F4.4
See related
AllianceGenome:WB:WBGene00012139
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in anatomical structure morphogenesis. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in ACTH-independent macronodular adrenal hyperplasia 2. Orthologous to human ARMC5 (armadillo repeat containing 5). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See T28F4.4 in Genome Data Viewer
Location:
chromosome: I
Exon count:
14
Sequence:
Chromosome: I; NC_003279.8 (7486648..7494736, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Degenerin-like protein asic-2 Neighboring gene Protein-tyrosine phosphatase Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Bromo domain-containing protein;HMG box domain-containing protein Neighboring gene ncRNA Neighboring gene SH3 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in anatomical structure morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Inverted formin-2;PUM-HD domain-containing protein
NP_001368639.1
  • Confirmed by transcript evidence
NP_492101.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    7486648..7494736 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059700.8 → NP_492101.1  PUM-HD domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492101.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q22853

  2. NM_001380711.2 → NP_001368639.1  Inverted formin-2 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1T5HUH9
Nucleotide Protein
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