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C55B7.3 Protein-tyrosine phosphatase [ Caenorhabditis elegans ]

Gene ID: 172359, updated on 4-Jan-2025

Summary

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Official Symbol
C55B7.3
Official Full Name
Protein-tyrosine phosphatase
Primary source
WormBase:WBGene00016942
Locus tag
CELE_C55B7.3
See related
AllianceGenome:WB:WBGene00016942
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Orthologous to human PTPN7 (protein tyrosine phosphatase non-receptor type 7). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See C55B7.3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003279.8 (6499982..6501410)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Mediator of RNA polymerase II transcription subunit 18 Neighboring gene Unconventional prefoldin RPB5 interactor Neighboring gene Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial Neighboring gene Protein kinase domain-containing protein Neighboring gene Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase Neighboring gene Protein OSCP1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Protein-tyrosine phosphatase
NP_001367695.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    6499982..6501410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001380558.2 → NP_001367695.1  Protein-tyrosine phosphatase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q966M2
    Conserved Domains (1) summary
    pfam00102
    Location:83 → 317
    Y_phosphatase; Protein-tyrosine phosphatase
Nucleotide Protein
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