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K04F10.3 Vacuolar protein sorting-associated protein 28 homolog [ Caenorhabditis elegans ]

Gene ID: 172334, updated on 18-Sep-2024

Summary

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Official Symbol
K04F10.3
Official Full Name
Vacuolar protein sorting-associated protein 28 homolog
Primary source
WormBase:WBGene00019396
Locus tag
CELE_K04F10.3
See related
AllianceGenome:WB:WBGene00019396
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See K04F10.3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003279.8 (6358585..6360457)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Endoprotease bli-4 Neighboring gene ncRNA Neighboring gene PAP-associated domain-containing protein Neighboring gene Protein KATNIP homolog Neighboring gene AXH domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynein modifiers in C. elegans: light chains suppress conditional heavy chain mutants. O'Rourke SM, et al. PLoS Genet, 2007 Aug. PMID 17676955, Free PMC Article
  2. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
  3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Vacuolar protein sorting-associated protein 28 homolog
NP_001122490.1
  • Confirmed by transcript evidence
NP_001122491.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    6358585..6360457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001129018.4 → NP_001122490.1  Vacuolar protein sorting-associated protein 28 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122490.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O44769

  2. NM_001129019.4 → NP_001122491.1  Vacuolar protein sorting-associated protein 28 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122491.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A9D7B8
Nucleotide Protein
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