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F21F3.6 DUF4149 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 172109, updated on 2-Nov-2024

Summary

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Official Symbol
F21F3.6
Official Full Name
DUF4149 domain-containing protein
Primary source
WormBase:WBGene00017675
Locus tag
CELE_F21F3.6
See related
AllianceGenome:WB:WBGene00017675
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be active in lysosomal membrane. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See F21F3.6 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (4911805..4914047, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Protein-S-isoprenylcysteine O-methyltransferase Neighboring gene Protein kinase domain-containing protein Neighboring gene putative peptidyl-alpha-hydroxyglycine alpha-amidating lyase pgal-1 Neighboring gene Transmembrane protein 230 Neighboring gene Importin N-terminal domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
is_active_in lysosomal membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
DUF4149 domain-containing protein
NP_491476.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    4911805..4914047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059075.9 → NP_491476.1  DUF4149 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491476.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    P91269
Nucleotide Protein
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