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cmt-1 Protein cmt-1 [ Caenorhabditis elegans ]

Gene ID: 172046, updated on 18-Sep-2024

Summary

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Official Symbol
cmt-1
Official Full Name
Protein cmt-1
Primary source
WormBase:WBGene00016564
Locus tag
CELE_C41D11.5
See related
AllianceGenome:WB:WBGene00016564
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See cmt-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
5
Sequence:
Chromosome: I; NC_003279.8 (4449879..4450927, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Eukaryotic translation initiation factor 3 subunit H Neighboring gene Endonuclease G, mitochondrial Neighboring gene TM2 domain-containing protein C41D11.9 Neighboring gene Enhanced RNAI (RNA interference) Neighboring gene Enhanced RNAI (RNA interference) Neighboring gene DNA2/NAM7 helicase helicase domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PCH-2 collaborates with CMT-1 to proofread meiotic homolog interactions. Giacopazzi S, et al. PLoS Genet, 2020 Jul. PMID 32730253, Free PMC Article
  2. The conserved AAA-ATPase PCH-2 (TRIP13) regulates spindle checkpoint strength. Défachelles L, et al. Mol Biol Cell, 2020 Sep 15. PMID 32697629, Free PMC Article
  3. TRIP13PCH-2 promotes Mad2 localization to unattached kinetochores in the spindle checkpoint response. Nelson CR, et al. J Cell Biol, 2015 Nov 9. PMID 26527744, Free PMC Article
  4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PCH-2 collaborates with CMT-1 to proofread meiotic homolog interactions.
    Title: PCH-2 collaborates with CMT-1 to proofread meiotic homolog interactions.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
Protein cmt-1
NP_491373.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    4449879..4450927 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058972.4 → NP_491373.1  Protein cmt-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491373.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O01975
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O01975.2

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