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ipla-4 phospholipase A2 [ Caenorhabditis elegans ]

Gene ID: 171937, updated on 4-Jan-2025

Summary

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Official Symbol
ipla-4
Official Full Name
phospholipase A2
Primary source
WormBase:WBGene00017026
Locus tag
CELE_D1037.5
See related
AllianceGenome:WB:WBGene00017026
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in lipid metabolic process. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See ipla-4 in Genome Data Viewer
Location:
chromosome: I
Exon count:
11
Sequence:
Chromosome: I; NC_003279.8 (3690145..3694021, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Ferritin Neighboring gene Ras-related protein Rab-8A Neighboring gene Protein SON Neighboring gene DNA mismatch repair proteins mutS family domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Muscle-Specific Lipid Hydrolysis Prolongs Lifespan through Global Lipidomic Remodeling. Schmeisser S, et al. Cell Rep, 2019 Dec 24. PMID 31875559
  2. Roles of acidic phospholipids and nucleotides in regulating membrane binding and activity of a calcium-independent phospholipase A2 isoform. Morrison K, et al. J Biol Chem, 2012 Nov 9. PMID 23007400, Free PMC Article
  3. Comparative genomics and functional study of lipid metabolic genes in Caenorhabditis elegans. Zhang Y, et al. BMC Genomics, 2013 Mar 12. PMID 23496871, Free PMC Article
  4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
  5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phospholipase A2
NP_491201.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    3690145..3694021 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058800.4 → NP_491201.3  phospholipase A2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491201.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9TYS0
    Conserved Domains (4) summary
    cd07212
    Location:176 → 502
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:55 → 123
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam13637
    Location:52 → 105
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:53 → 82
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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