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ule-1 Chitin-binding type-2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 171778, updated on 4-Jan-2025

Summary

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Official Symbol
ule-1
Official Full Name
Chitin-binding type-2 domain-containing protein
Primary source
WormBase:WBGene00021005
Locus tag
CELE_W03F11.1
See related
AllianceGenome:WB:WBGene00021005
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable chitin binding activity. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

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See ule-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
4
Sequence:
Chromosome: I; NC_003279.8 (2219468..2222313, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Rx N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene Afadin;FHA domain-containing protein;PDZ domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Receptor-type guanylate cyclase gcy-17 Neighboring gene Major sperm protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A C. elegans Myc-like network cooperates with semaphorin and Wnt signaling pathways to control cell migration. Pickett CL, et al. Dev Biol, 2007 Oct 15. PMID 17826759, Free PMC Article
  2. The CHARGE syndrome ortholog CHD-7 regulates TGF-β pathways in Caenorhabditis elegans. Jofré DM, et al. Proc Natl Acad Sci U S A, 2022 Apr 12. PMID 35394881, Free PMC Article
  3. Galectin LEC-1 plays a defensive role against damage due to oxidative stress in Caenorhabditis elegans. Takeuchi T, et al. J Biochem, 2013 Nov. PMID 23935187
  4. Germline Maintenance Through the Multifaceted Activities of GLH/Vasa in Caenorhabditis elegans P Granules. Marnik EA, et al. Genetics, 2019 Nov. PMID 31506335, Free PMC Article
  5. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Chitin-binding type-2 domain-containing protein
NP_001293326.1
  • Confirmed by transcript evidence
NP_490942.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    2219468..2222313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058541.7 → NP_490942.1  Chitin-binding type-2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_490942.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O01780
    Conserved Domains (1) summary
    smart00494
    Location:159 → 204
    ChtBD2; Chitin-binding domain type 2

  2. NM_001306397.3 → NP_001293326.1  Chitin-binding type-2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293326.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    X5M5P2
    Conserved Domains (1) summary
    smart00494
    Location:58 → 103
    ChtBD2; Chitin-binding domain type 2
Nucleotide Protein
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