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Y48G8AR.2 FYVE-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 171702, updated on 9-Dec-2024

Summary

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Official Symbol
Y48G8AR.2
Official Full Name
FYVE-type domain-containing protein
Primary source
WormBase:WBGene00021693
Locus tag
CELE_Y48G8AR.2
See related
AllianceGenome:WB:WBGene00021693
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable metal ion binding activity. Orthologous to human SYTL3 (synaptotagmin like 3). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See Y48G8AR.2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
9
Sequence:
Chromosome: I; NC_003279.8 (1282101..1285435)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Origin recognition complex subunit 1 Neighboring gene Death-associated protein kinase dapk-1;non-specific serine/threonine protein kinase Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
FYVE-type domain-containing protein
NP_490838.3
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    1282101..1285435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058437.7 → NP_490838.3  FYVE-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_490838.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9N3N6
    Conserved Domains (2) summary
    cd15747
    Location:95 → 148
    FYVE_Slp3_4_5; FYVE-related domain found in the synaptotagmin-like proteins 3, 4, 5
    cl22851
    Location:15 → 159
    PHD_SF; PHD finger superfamily
Nucleotide Protein
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