U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Vmn1r213 vomeronasal 1 receptor 213 [ Mus musculus (house mouse) ]

Gene ID: 171249, updated on 27-Nov-2024

Summary

Official Symbol
Vmn1r213provided by MGI
Official Full Name
vomeronasal 1 receptor 213provided by MGI
Primary source
MGI:MGI:2159664
See related
Ensembl:ENSMUSG00000060024 AllianceGenome:MGI:2159664
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1rh6
Summary
Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Vmn1r213 in Genome Data Viewer
Location:
13 A3.1; 13 9.45 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (23195419..23196573)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (23011249..23012403)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor Vmn1r-ps122 pseudogene Neighboring gene STARR-seq mESC enhancer starr_33918 Neighboring gene STARR-seq mESC enhancer starr_33919 Neighboring gene vomeronasal 1 receptor, pseudogene 123 Neighboring gene vomeronasal 1 receptor, pseudogene 124 Neighboring gene vomeronasal 1 receptor, pseudogene 125

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables pheromone binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables pheromone receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within response to pheromone ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
vomeronasal 1 receptor 213
Names
vomernasal 1 receptor Vmn1r213
vomeronasal 1 receptor, H6

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_134215.1NP_598976.1  vomeronasal 1 receptor 213

    See identical proteins and their annotated locations for NP_598976.1

    Status: PROVISIONAL

    Source sequence(s)
    AY065532
    Consensus CDS
    CCDS26328.1
    UniProtKB/TrEMBL
    Q8R278
    Related
    ENSMUSP00000076163.2, ENSMUST00000076897.2
    Conserved Domains (1) summary
    pfam03402
    Location:121371
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    23195419..23196573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)