U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DFA_03229 uncharacterized protein [ Cavenderia fasciculata ]

Gene ID: 14877561, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
DFA_03229
Gene description
uncharacterized protein
Locus tag
DFA_03229
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavenderia fasciculata (isolate: SH3)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DFA_03229 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_004457737.1Genomic Context describing neighboring genes Neighboring gene WD40 repeat-containing protein Neighboring gene leucine-rich repeat-containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004457737.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in porphyrin-containing compound biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457737.1 Reference assembly

    Range
    1301061..1303273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004362777.1 → XP_004362834.1  uncharacterized protein DFA_03229 [Cavenderia fasciculata]

    See identical proteins and their annotated locations for XP_004362834.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4PGZ9
    Conserved Domains (2) summary
    PRK09057
    Location:154 → 543
    PRK09057; coproporphyrinogen III oxidase; Provisional
    pfam06969
    Location:469 → 528
    HemN_C; HemN C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases