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PIERCE2 piercer of microtubule wall 2 [ Homo sapiens (human) ]

Gene ID: 145788, updated on 4-Jan-2025

Summary

Official Symbol
PIERCE2provided by HGNC
Official Full Name
piercer of microtubule wall 2provided by HGNC
Primary source
HGNC:HGNC:44654
See related
Ensembl:ENSG00000261652 MIM:619669; AllianceGenome:HGNC:44654
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C14orf65; C15orf65
Summary
Predicted to be involved in axoneme assembly; determination of left/right symmetry; and flagellated sperm motility. Located in axonemal microtubule. [provided by Alliance of Genome Resources, Jan 2025]
Expression
Broad expression in testis (RPKM 4.6), thyroid (RPKM 2.3) and 23 other tissues See more
Orthologs
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Genomic context

See PIERCE2 in Genome Data Viewer
Location:
15q21.3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (55408495..55418798)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (53211727..53222035)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (55700693..55710996)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9443 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9444 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class B Neighboring gene NANOG hESC enhancer GRCh37_chr15:55644998-55645641 Neighboring gene DNAAF4-CCPG1 readthrough (NMD candidate) Neighboring gene cell cycle progression 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:55674784-55674963 Neighboring gene microRNA 628 Neighboring gene Sharpr-MPRA regulatory region 6559 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9445 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9446 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9447 Neighboring gene dynein axonemal assembly factor 4 Neighboring gene thioesterase superfamily member 4 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9448 Neighboring gene uncharacterized mitochondrial protein AtMg00860-like Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6454

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • FLJ27352, DKFZp686K1763

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in axoneme assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cilium movement ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in determination of left/right symmetry ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in flagellated sperm motility ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in axonemal A tubule inner sheath ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in axonemal microtubule IDA
Inferred from Direct Assay
more info
PubMed 
located_in axonemal microtubule ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in sperm flagellum ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
piercer of microtubule wall 2 protein
Names
uncharacterized protein C15orf65

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001198784.2NP_001185713.1  piercer of microtubule wall 2 protein

    See identical proteins and their annotated locations for NP_001185713.1

    Status: VALIDATED

    Source sequence(s)
    AC013355, AK130862, AV735277, BX648577
    Consensus CDS
    CCDS58363.1
    UniProtKB/Swiss-Prot
    H3BRN8
    Related
    ENSP00000456337.1, ENST00000569691.2
    Conserved Domains (1) summary
    pfam14892
    Location:58109
    DUF4490; Domain of unknown function (DUF4490)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    55408495..55418798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    53211727..53222035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)