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lncRNA:CR43830 long non-coding RNA:CR43830 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 14462589, updated on 11-Sep-2024

Summary

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Official Symbol
lncRNA:CR43830provided by FlyBase
Official Full Name
long non-coding RNA:CR43830provided by FlyBase
Primary source
FLYBASE:FBgn0264378
Locus tag
Dmel_CR43830
See related
AllianceGenome:FB:FBgn0264378
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43830; Dmel\CR43830; lincRNA.311
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Genomic context

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See lncRNA:CR43830 in Genome Data Viewer
Location:
51D7-51D7; 2-73 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14994559..14995195)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10882064..10882700)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene parcas Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene hibris Neighboring gene Odorant-binding protein 51a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
  2. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR43830-RA; Dmel\lncRNA:CR43830-RA; CR43830-RA; Dmel\CR43830-RA
  • lncRNA:CR43830-RB; Dmel\lncRNA:CR43830-RB; CR43830-RB; Dmel\CR43830-RB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    14994559..14995195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_073877.2 RNA Sequence

    Status: REVIEWED

  2. NR_124553.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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