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SAXO1 stabilizer of axonemal microtubules 1 [ Patagioenas fasciata (band-tailed pigeon) ]

Gene ID: 136115237, updated on 3-Dec-2024

Summary

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Gene symbol
SAXO1
Gene description
stabilizer of axonemal microtubules 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Patagioenas fasciata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas
Orthologs
human mouse all
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Genomic context

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See SAXO1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current bPatFas1.hap2 (GCF_036971685.1) Z NC_089087.1 (18587240..18595454)

Chromosome Z - NC_089087.1Genomic Context describing neighboring genes Neighboring gene small Cajal body-specific RNA 8 Neighboring gene perilipin 2 Neighboring gene HAUS augmin like complex subunit 6 Neighboring gene ADAMTS-like protein 1 Neighboring gene U1 spliceosomal RNA Neighboring gene ADAMTS-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089087.1 Chromosome Z Reference bPatFas1.hap2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axonemal microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm flagellum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stabilizer of axonemal microtubules 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036971685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPatFas1.hap2

Genomic

  1. NC_089087.1 Reference bPatFas1.hap2

    Range
    18587240..18595454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065861227.1 → XP_065717299.1  stabilizer of axonemal microtubules 1

    UniProtKB/TrEMBL
    A0A1V4KK40
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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