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DENND4C DENN domain containing 4C [ Patagioenas fasciata (band-tailed pigeon) ]

Gene ID: 136114713, updated on 3-Dec-2024

Summary

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Gene symbol
DENND4C
Gene description
DENN domain containing 4C
Gene type
protein coding
RefSeq status
MODEL
Organism
Patagioenas fasciata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Columbimorphae; Columbiformes; Columbidae; Patagioenas
Orthologs
human mouse all
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Genomic context

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See DENND4C in Genome Data Viewer
Location:
chromosome: Z
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2024_06 current bPatFas1.hap2 (GCF_036971685.1) Z NC_089087.1 (18425264..18500213, complement)

Chromosome Z - NC_089087.1Genomic Context describing neighboring genes Neighboring gene alkaline ceramidase 2 Neighboring gene ribosomal protein S6 Neighboring gene perilipin 2 Neighboring gene small Cajal body-specific RNA 8 Neighboring gene HAUS augmin like complex subunit 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089087.1 Chromosome Z Reference bPatFas1.hap2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DENN domain-containing protein 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036971685.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPatFas1.hap2

Genomic

  1. NC_089087.1 Reference bPatFas1.hap2

    Range
    18425264..18500213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065860183.1 → XP_065716255.1  DENN domain-containing protein 4C isoform X2

    UniProtKB/TrEMBL
    A0A1V4KK30

  2. XM_065860182.1 → XP_065716254.1  DENN domain-containing protein 4C isoform X1

    UniProtKB/TrEMBL
    A0A1V4KK50
Nucleotide Protein
Heading Accession and Version

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