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LOC135153030 B-box zinc finger protein 20-like [ Daucus carota subsp. sativus ]

Gene ID: 135153030, updated on 2-Apr-2024

Summary

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Gene symbol
LOC135153030
Gene description
B-box zinc finger protein 20-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Daucus carota subsp. sativus (sub-species: sativus)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus; Daucus sect. Daucus
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Genomic context

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See LOC135153030 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_03 current DH1 v3.0 (GCF_001625215.2) 5 NC_030385.2 (45914941..45916490, complement)

Chromosome 5 - NC_030385.2Genomic Context describing neighboring genes Neighboring gene B-box zinc finger protein 22-like Neighboring gene B-box zinc finger protein 20-like Neighboring gene NADH kinase Neighboring gene bidirectional sugar transporter SWEET2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030385.2 Chromosome 5 Reference DH1 v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in photomorphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-box zinc finger protein 20-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001625215.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DH1 v3.0 Primary Assembly

Genomic

  1. NC_030385.2 Reference DH1 v3.0 Primary Assembly

    Range
    45914941..45916490 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064094662.1 → XP_063950732.1  B-box zinc finger protein 20-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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