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NCLIV_006860 hypothetical protein [ Neospora caninum Liverpool ]

Gene ID: 13446269, updated on 26-Oct-2024

Summary

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Gene symbol
NCLIV_006860
Gene description
hypothetical protein
Locus tag
NCLIV_006860
See related
ToxoDB:NCLIV_006860; VEuPathDB:NCLIV_006860
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Neospora caninum Liverpool (strain: Liverpool)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Neospora
Orthologs
Toxoplasma gondii all
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Genomic context

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See NCLIV_006860 in Genome Data Viewer
Location:
chromosome: II
Exon count:
13
Sequence:
Chromosome: II; NC_018387.1 (2079858..2085433)

Chromosome II - NC_018387.1Genomic Context describing neighboring genes Neighboring gene tRNA-Ala Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA-Pro

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018387.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive evaluation of Toxoplasma gondii VEG and Neospora caninum LIV genomes with tachyzoite stage transcriptome and proteome defines novel transcript features. Ramaprasad A, et al. PLoS One, 2015. PMID 25875305, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018387.1 Reference assembly

    Range
    2079858..2085433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003880197.1 → XP_003880246.1  hypothetical protein NCLIV_006860 [Neospora caninum Liverpool]

    See identical proteins and their annotated locations for XP_003880246.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0V920
    Conserved Domains (1) summary
    PTZ00371
    Location:14 → 493
    PTZ00371; aspartyl aminopeptidase; Provisional
Nucleotide Protein
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