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NCLIV_006650 hypothetical protein [ Neospora caninum Liverpool ]

Gene ID: 13446248, updated on 26-Oct-2024

Summary

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Gene symbol
NCLIV_006650
Gene description
hypothetical protein
Locus tag
NCLIV_006650
See related
ToxoDB:NCLIV_006650; VEuPathDB:NCLIV_006650
Gene type
protein coding
RNA name
conserved hypothetical protein
RefSeq status
PROVISIONAL
Organism
Neospora caninum Liverpool (strain: Liverpool)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Neospora
Orthologs
Toxoplasma gondii all
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Genomic context

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See NCLIV_006650 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_018387.1 (1920873..1921646)

Chromosome II - NC_018387.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018387.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive evaluation of Toxoplasma gondii VEG and Neospora caninum LIV genomes with tachyzoite stage transcriptome and proteome defines novel transcript features. Ramaprasad A, et al. PLoS One, 2015. PMID 25875305, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018387.1 Reference assembly

    Range
    1920873..1921646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003880176.1 → XP_003880225.1  conserved hypothetical protein [Neospora caninum Liverpool]

    See identical proteins and their annotated locations for XP_003880225.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0V8Z9
    Conserved Domains (1) summary
    pfam15341
    Location:102 → 221
    SLX9; Ribosome biogenesis protein SLX9
Nucleotide Protein
Heading Accession and Version

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