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LOC134201865 E3 ubiquitin-protein ligase PPP1R11-like [ Bombyx mori (domestic silkworm) ]

Gene ID: 134201865, updated on 18-Sep-2024

Summary

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Gene symbol
LOC134201865
Gene description
E3 ubiquitin-protein ligase PPP1R11-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombyx mori
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
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Genomic context

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See LOC134201865 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 4 NC_085110.1 (1105093..1117533, complement)

Chromosome 4 - NC_085110.1Genomic Context describing neighboring genes Neighboring gene probable H/ACA ribonucleoprotein complex subunit 1 Neighboring gene uncharacterized LOC101746773 Neighboring gene uncharacterized LOC134201867 Neighboring gene dermal papilla derived protein 13 Neighboring gene uncharacterized LOC134201869 Neighboring gene uncharacterized LOC101746914

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085110.1 Chromosome 4 Reference ASM3026992v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase PPP1R11-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3026992v2 Primary Assembly

Genomic

  1. NC_085110.1 Reference ASM3026992v2 Primary Assembly

    Range
    1105093..1117533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062677134.1 → XP_062533118.1  E3 ubiquitin-protein ligase PPP1R11-like isoform X1

  2. XM_062677135.1 → XP_062533119.1  E3 ubiquitin-protein ligase PPP1R11-like isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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