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pitpnb phosphatidylinositol transfer protein, beta [ Platichthys flesus (European flounder) ]

Gene ID: 133974792, updated on 12-Sep-2024

Summary

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Gene symbol
pitpnb
Gene description
phosphatidylinositol transfer protein, beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Platichthys flesus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Pleuronectidae; Platichthys
Orthologs
zebrafish all
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Genomic context

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See pitpnb in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_01 current fPlaFle2.1 (GCF_949316205.1) 19 NC_084963.1 (18062305..18079230)

Chromosome 19 - NC_084963.1Genomic Context describing neighboring genes Neighboring gene phospholipase A2 group III Neighboring gene tetratricopeptide repeat domain 28 Neighboring gene N-alpha-acetyltransferase 25, NatB auxiliary subunit Neighboring gene BRCA1 associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084963.1 Chromosome 19 Reference fPlaFle2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol transfer protein beta isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949316205.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPlaFle2.1

Genomic

  1. NC_084963.1 Reference fPlaFle2.1

    Range
    18062305..18079230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062412540.1 → XP_062268524.1  phosphatidylinositol transfer protein beta isoform

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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