U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC132253691 cytochrome P450 CYP82J17-like [ Vitis vinifera (wine grape) ]

Gene ID: 132253691, updated on 3-Dec-2024

Summary

Go to the top of the page Help
Gene symbol
LOC132253691
Gene description
cytochrome P450 CYP82J17-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis vinifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC132253691 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 4 NC_081808.1 (25327894..25329907)

Chromosome 4 - NC_081808.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 3-alpha Neighboring gene cytochrome P450 CYP82J17 Neighboring gene E3 ubiquitin-protein ligase RGLG3 Neighboring gene DNA polymerase delta catalytic subunit Neighboring gene increased DNA methylation 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_081808.1 Chromosome 4 Reference ASM3070453v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to other organism IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cytochrome P450 CYP82J17-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3070453v1 Primary Assembly

Genomic

  1. NC_081808.1 Reference ASM3070453v1 Primary Assembly

    Range
    25327894..25329907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059736610.1 → XP_059592593.1  cytochrome P450 CYP82J17-like

    UniProtKB/TrEMBL
    A0A438BTS9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.