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grl-30 Ground-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 13212329, updated on 17-Oct-2024

Summary

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Official Symbol
grl-30
Official Full Name
Ground-like domain-containing protein
Primary source
WormBase:WBGene00001739
Locus tag
CELE_T24A6.3
See related
AllianceGenome:WB:WBGene00001739
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See grl-30 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (3556286..3556804)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene YitH/HolE acetyltransferase (GNAT) domain-containing protein Neighboring gene Ground-like domain-containing protein Neighboring gene Ground-like domain-containing protein Neighboring gene ncRNA Neighboring gene GNAT family N-acetyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Caenorhabditis elegans has scores of hedgehog-related genes: sequence and expression analysis. Aspöck G, et al. Genome Res, 1999 Oct. PMID 10523520
  2. Evolution of hedgehog and hedgehog-related genes, their origin from Hog proteins in ancestral eukaryotes and discovery of a novel Hint motif. Bürglin TR. BMC Genomics, 2008 Mar 11. PMID 18334026, Free PMC Article
  3. Transcriptome analyses describe the consequences of persistent HIF-1 over-activation in Caenorhabditis elegans. Feng D, et al. PLoS One, 2024. PMID 38517909, Free PMC Article
  4. Meta-Analysis of Caenorhabditis elegans Transcriptomics Implicates Hedgehog-Like Signaling in Host-Microbe Interactions. Zárate-Potes A, et al. Front Microbiol, 2022. PMID 35620104, Free PMC Article
  5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Ground-like domain-containing protein
NP_001256027.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    3556286..3556804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001269098.1 → NP_001256027.1  Ground-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256027.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D6VP99
    Conserved Domains (1) summary
    pfam04155
    Location:67 → 138
    Ground-like; Ground-like domain
Nucleotide Protein
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