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STXBP4 syntaxin binding protein 4 [ Nyctereutes procyonoides (raccoon dog) ]

Gene ID: 129516077, updated on 26-Mar-2024

Summary

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Gene symbol
STXBP4
Gene description
syntaxin binding protein 4
Locus tag
NYPRO_LOCUS704
Gene type
protein coding
RefSeq status
MODEL
Organism
Nyctereutes procyonoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Nyctereutes
Orthologs
human mouse all
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Genomic context

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See STXBP4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_04 current NYPRO_anot_genome (GCF_905146905.1) Unplaced Scaffold NW_026575020.1 (12003276..12189039)

NW_026575020.1Genomic Context describing neighboring genes Neighboring gene target of myb1 like 1 membrane trafficking protein Neighboring gene cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene U4 spliceosomal RNA Neighboring gene HLF transcription factor, PAR bZIP family member Neighboring gene monocyte to macrophage differentiation associated

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026575020 Unplaced Scaffold Reference NYPRO_anot_genome Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in insulin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of insulin secretion involved in cellular response to glucose stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-binding protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_905146905.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NYPRO_anot_genome Primary Assembly

Genomic

  1. NW_026575020.1 Reference NYPRO_anot_genome Primary Assembly

    Range
    12003276..12189039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055335437.1 → XP_055191412.1  syntaxin-binding protein 4 isoform X1

  2. XM_055335441.1 → XP_055191416.1  syntaxin-binding protein 4 isoform X2

  3. XM_055335444.1 → XP_055191419.1  syntaxin-binding protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A811XRB0

  4. XM_055335447.1 → XP_055191422.1  syntaxin-binding protein 4 isoform X4

  5. XM_055335450.1 → XP_055191425.1  syntaxin-binding protein 4 isoform X5

RNA

  1. XR_008665698.1 RNA Sequence

  2. XR_008665699.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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