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BIVM basic, immunoglobulin-like variable motif containing [ Tympanuchus pallidicinctus (lesser prairie-chicken) ]

Gene ID: 128092237, updated on 25-Mar-2024

Summary

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Gene symbol
BIVM
Gene description
basic, immunoglobulin-like variable motif containing
Gene type
protein coding
RefSeq status
MODEL
Organism
Tympanuchus pallidicinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Tympanuchus
Orthologs
human mouse all
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Genomic context

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See BIVM in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current pur_lepc_1.0 (GCF_026119805.1) Unplaced Scaffold NW_026294780.1 (19017537..19032565, complement)

NW_026294780.1Genomic Context describing neighboring genes Neighboring gene protein-lysine methyltransferase METTL21E-like Neighboring gene ERCC excision repair 5, endonuclease Neighboring gene protein O-glucosyltransferase 2 Neighboring gene testis expressed 30 Neighboring gene methyltransferase 21C, AARS1 lysine Neighboring gene tripeptidyl peptidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026294780 Unplaced Scaffold Reference pur_lepc_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic immunoglobulin-like variable motif-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026119805.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pur_lepc_1.0

Genomic

  1. NW_026294780.1 Reference pur_lepc_1.0

    Range
    19017537..19032565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052705931.1 → XP_052561891.1  basic immunoglobulin-like variable motif-containing protein isoform X1

  2. XM_052705932.1 → XP_052561892.1  basic immunoglobulin-like variable motif-containing protein isoform X2

  3. XM_052705930.1 → XP_052561890.1  basic immunoglobulin-like variable motif-containing protein isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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