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snoRNA:Psi28S-2996 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798535, updated on 11-Sep-2024

Summary

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Official Symbol
snoRNA:Psi28S-2996provided by FlyBase
Primary source
FLYBASE:FBgn0082980
Locus tag
Dmel_CR43565
See related
AllianceGenome:FB:FBgn0082980
Gene type
ncRNA
RNA name
snoRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR43565; Dmel\CR43565; Psi 28S-2996; psi28s-2996; snoRNA:psi285-2996; snoRNA:RpL5-a
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Genomic context

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See snoRNA:Psi28S-2996 in Genome Data Viewer
Location:
40F7-40F7; 2-54 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (22535458..22535593, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (22428190..22428325, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Tif-IA Neighboring gene Meiosis regulator and mRNA stability factor 1 Neighboring gene pseudo Neighboring gene long non-coding RNA:CR46268 Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein L5 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Harnessing changes in open chromatin determined by ATAC-seq to generate insulin-responsive reporter constructs. Merrill CB, et al. BMC Genomics, 2022 May 25. PMID 35614386, Free PMC Article
  2. Genome-wide analyses of two families of snoRNA genes from Drosophila melanogaster, demonstrating the extensive utilization of introns for coding of snoRNAs. Huang ZP, et al. RNA, 2005 Aug. PMID 15987805, Free PMC Article
  3. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • snoRNA:Psi28S-2996-RA; Dmel\snoRNA:Psi28S-2996-RA; CR43565-RA; Dmel\CR43565-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    22535458..22535593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_048040.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
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