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mir-2279 mir-2279 stem loop [ Drosophila melanogaster (fruit fly) ]

Gene ID: 12798493, updated on 11-Sep-2024

Summary

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Official Symbol
mir-2279provided by FlyBase
Official Full Name
mir-2279 stem loopprovided by FlyBase
Primary source
FLYBASE:FBgn0262204
Locus tag
Dmel_CR42911
See related
miRBase:MI0011289; AllianceGenome:FB:FBgn0262204
Gene type
miscRNA
RNA name
mir-2279 precursor RNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR42911; dme-mir-2279; dme-miR-2279; Dmel\CR42911; miR-2279
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Genomic context

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See mir-2279 in Genome Data Viewer
Location:
41A1-41A1; 2-55 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (2552170..2552282, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2RHet NW_001848856.1 (1322833..1322945, complement)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46487 Neighboring gene pseudo Neighboring gene Major Facilitator Superfamily Transporter 17 Neighboring gene long non-coding RNA:CR46481 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line. Lau NC, et al. Genome Res, 2009 Oct. PMID 19541914, Free PMC Article
  2. Dysregulated miRNA and mRNA Expression Affect Overlapping Pathways in a Huntington's Disease Model. Zsindely N, et al. Int J Mol Sci, 2023 Jul 26. PMID 37569316, Free PMC Article
  3. Adaptive evolution of testis-specific, recently evolved, clustered miRNAs in Drosophila. Mohammed J, et al. RNA, 2014 Aug. PMID 24942624, Free PMC Article
  4. Pgc suppresses the zygotically acting RNA decay pathway to protect germ plasm RNAs in the Drosophila embryo. Hanyu-Nakamura K, et al. Development, 2019 Apr 4. PMID 30890569
  5. Global identification of functional microRNA-mRNA interactions in Drosophila. Wessels HH, et al. Nat Commun, 2019 Apr 9. PMID 30967537, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • mir-2279-RM; Dmel\mir-2279-RM; CR42911-RM; Dmel\CR42911-RM

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    2552170..2552282 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_047702.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Molecular Biology Databases
Research Materials